Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-3A0A075B695 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Gm8493-201ENSMUST00000196881 489 ntBASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-3A0A075B695 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-3A0A075B695 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Gm45417-201ENSMUST00000209533 758 ntBASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav9d-3A0A075B695 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9d-3A0A075B695 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9d-3A0A075B695 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms