Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-4A0A075B652 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav5-4A0A075B652 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav5-4A0A075B652 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Gm12251-201ENSMUST00000117893 792 ntBASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav5-4A0A075B652 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.75■□□□□ 0.11
Trav5-4A0A075B652 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Mir7075-201ENSMUST00000184187 82 ntBASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav5-4A0A075B652 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav5-4A0A075B652 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms