Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm22238-201ENSMUST00000175222 88 ntBASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav15d-1-dv6d-1A0A075B624 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms