Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp6v1c1Q9Z1G3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.61■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Atp6v1c1Q9Z1G3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Atp6v1c1Q9Z1G3 Fst-202ENSMUST00000223640 2612 ntBASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Atp6v1c1Q9Z1G3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Atp6v1c1Q9Z1G3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Atp6v1c1Q9Z1G3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Gm7143-201ENSMUST00000222811 859 ntBASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Atp6v1c1Q9Z1G3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Rps24-207ENSMUST00000224568 714 ntBASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Atp6v1c1Q9Z1G3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Atp6v1c1Q9Z1G3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp6v1c1Q9Z1G3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atp6v1c1Q9Z1G3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Atp6v1c1Q9Z1G3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Atp6v1c1Q9Z1G3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Atp6v1c1Q9Z1G3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms