Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cldn3Q9Z0G9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Cldn3Q9Z0G9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn3Q9Z0G9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn3Q9Z0G9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cldn3Q9Z0G9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Gm10493-201ENSMUST00000097270 612 ntBASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn3Q9Z0G9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Cldn3Q9Z0G9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms