Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cx3cr1Q9Z0D9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cx3cr1Q9Z0D9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.12■□□□□ 0.17
Cx3cr1Q9Z0D9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cx3cr1Q9Z0D9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cx3cr1Q9Z0D9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cx3cr1Q9Z0D9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Cx3cr1Q9Z0D9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cx3cr1Q9Z0D9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms