Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsf13bQ9WU72 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf13bQ9WU72 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsf13bQ9WU72 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Gm6211-202ENSMUST00000167849 925 ntBASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tnfsf13bQ9WU72 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsf13bQ9WU72 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsf13bQ9WU72 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfsf13bQ9WU72 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfsf13bQ9WU72 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Gm4968-201ENSMUST00000071458 858 ntBASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsf13bQ9WU72 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsf13bQ9WU72 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms