Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Scn8aQ9WTU3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scn8aQ9WTU3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scn8aQ9WTU3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.28■□□□□ 0.68
Scn8aQ9WTU3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn8aQ9WTU3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn8aQ9WTU3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn8aQ9WTU3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scn8aQ9WTU3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn8aQ9WTU3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Scn8aQ9WTU3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scn8aQ9WTU3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Gm4968-201ENSMUST00000071458 858 ntBASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scn8aQ9WTU3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scn8aQ9WTU3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scn8aQ9WTU3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms