Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.21■□□□□ 0.51
Vps29Q9QZ88 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vps29Q9QZ88 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps29Q9QZ88 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Gm27801-201ENSMUST00000184174 223 ntBASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps29Q9QZ88 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps29Q9QZ88 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps29Q9QZ88 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Gm26833-201ENSMUST00000180899 440 ntBASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps29Q9QZ88 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps29Q9QZ88 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vps29Q9QZ88 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Vps29Q9QZ88 BC021767-201ENSMUST00000126387 1716 ntBASIC18.15■□□□□ 0.5
Vps29Q9QZ88 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.15■□□□□ 0.5
Vps29Q9QZ88 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps29Q9QZ88 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms