Protein–RNA interactions for Protein: Q9JJW6

Alyref2, Aly/REF export factor 2, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alyref2Q9JJW6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Alyref2Q9JJW6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Alyref2Q9JJW6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Alyref2Q9JJW6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Alyref2Q9JJW6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Alyref2Q9JJW6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Alyref2Q9JJW6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.02■□□□□ 0.31
Alyref2Q9JJW6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Alyref2Q9JJW6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Alyref2Q9JJW6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Alyref2Q9JJW6 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.01■□□□□ 0.31
Alyref2Q9JJW6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms