Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tubb3Q9ERD7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Gm40848-201ENSMUST00000221998 324 ntBASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tubb3Q9ERD7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tubb3Q9ERD7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.89■□□□□ 0.62
Tubb3Q9ERD7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tubb3Q9ERD7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Smad6-203ENSMUST00000179458 273 ntBASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Gm5874-201ENSMUST00000096101 508 ntBASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tubb3Q9ERD7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tubb3Q9ERD7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tubb3Q9ERD7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tubb3Q9ERD7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms