Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm43859-201ENSMUST00000200075 1412 ntBASIC26.58■■□□□ 1.85
Cpsf1Q9EPU4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Gm12527-201ENSMUST00000117967 564 ntBASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Hsf1-204ENSMUST00000226872 2104 ntBASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Cpsf1Q9EPU4 Gm10653-202ENSMUST00000139570 835 ntBASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC26.56■■□□□ 1.84
Cpsf1Q9EPU4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cpsf1Q9EPU4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC26.54■■□□□ 1.84
Cpsf1Q9EPU4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cpsf1Q9EPU4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cpsf1Q9EPU4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Gm19094-201ENSMUST00000209791 1246 ntBASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Gm6365-201ENSMUST00000054711 744 ntBASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cpsf1Q9EPU4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cpsf1Q9EPU4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cpsf1Q9EPU4 Gm18688-201ENSMUST00000204695 1859 ntBASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cpsf1Q9EPU4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 AC122769.4-201ENSMUST00000228166 901 ntBASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC26.47■■□□□ 1.83
Cpsf1Q9EPU4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms