Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rrp8Q9DB85 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rrp8Q9DB85 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp8Q9DB85 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Rrp8Q9DB85 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp8Q9DB85 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.67■□□□□ 0.58
Rrp8Q9DB85 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp8Q9DB85 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp8Q9DB85 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rrp8Q9DB85 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rrp8Q9DB85 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
Rrp8Q9DB85 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Gm12896-201ENSMUST00000118430 226 ntBASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rrp8Q9DB85 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Gm27275-201ENSMUST00000184318 272 ntBASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Mir6982-201ENSMUST00000184354 68 ntBASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp8Q9DB85 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rrp8Q9DB85 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.6■□□□□ 0.57
Rrp8Q9DB85 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms