Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rsph9Q9D9V4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rsph9Q9D9V4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rsph9Q9D9V4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rsph9Q9D9V4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rsph9Q9D9V4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Mir5133-201ENSMUST00000174955 77 ntBASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rsph9Q9D9V4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.58■□□□□ 0.57
Rsph9Q9D9V4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Rsph9Q9D9V4 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.57■□□□□ 0.56
Rsph9Q9D9V4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph9Q9D9V4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.57■□□□□ 0.56
Rsph9Q9D9V4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rsph9Q9D9V4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rsph9Q9D9V4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rsph9Q9D9V4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms