Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Reep4-203ENSMUST00000226563 1444 ntBASIC20.2■□□□□ 0.82
Gm3404Q9D506 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Gm42778-201ENSMUST00000199644 553 ntBASIC20.2■□□□□ 0.82
Gm3404Q9D506 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.2■□□□□ 0.82
Gm3404Q9D506 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3404Q9D506 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.19■□□□□ 0.82
Gm3404Q9D506 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.19■□□□□ 0.82
Gm3404Q9D506 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.19■□□□□ 0.82
Gm3404Q9D506 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3404Q9D506 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm3404Q9D506 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.18■□□□□ 0.82
Gm3404Q9D506 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3404Q9D506 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm3404Q9D506 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Gm3404Q9D506 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Gm38205-201ENSMUST00000192243 258 ntBASIC20.16■□□□□ 0.82
Gm3404Q9D506 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.16■□□□□ 0.82
Gm3404Q9D506 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm3404Q9D506 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Gm8495-201ENSMUST00000188740 694 ntBASIC20.15■□□□□ 0.82
Gm3404Q9D506 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.15■□□□□ 0.82
Gm3404Q9D506 Gm42642-201ENSMUST00000200683 355 ntBASIC20.15■□□□□ 0.82
Gm3404Q9D506 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.15■□□□□ 0.82
Gm3404Q9D506 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm3404Q9D506 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3404Q9D506 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
Gm3404Q9D506 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3404Q9D506 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm3404Q9D506 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Gm7860-201ENSMUST00000121190 879 ntBASIC20.14■□□□□ 0.81
Gm3404Q9D506 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm3404Q9D506 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Gm3404Q9D506 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms