Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim42Q9D2H5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
Trim42Q9D2H5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Gm40881-201ENSMUST00000223397 166 ntBASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim42Q9D2H5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim42Q9D2H5 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Gm13238-201ENSMUST00000117655 780 ntBASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim42Q9D2H5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim42Q9D2H5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim42Q9D2H5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms