Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.1■□□□□ 0.49
Upk1aQ9D132 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.1■□□□□ 0.49
Upk1aQ9D132 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1aQ9D132 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Serp2-204ENSMUST00000228055 705 ntBASIC18.09■□□□□ 0.49
Upk1aQ9D132 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Upk1aQ9D132 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upk1aQ9D132 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upk1aQ9D132 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upk1aQ9D132 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Upk1aQ9D132 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.08■□□□□ 0.48
Upk1aQ9D132 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Upk1aQ9D132 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.07■□□□□ 0.48
Upk1aQ9D132 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Upk1aQ9D132 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.06■□□□□ 0.48
Upk1aQ9D132 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.06■□□□□ 0.48
Upk1aQ9D132 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Upk1aQ9D132 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.05■□□□□ 0.48
Upk1aQ9D132 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.05■□□□□ 0.48
Upk1aQ9D132 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Upk1aQ9D132 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Upk1aQ9D132 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.03■□□□□ 0.48
Upk1aQ9D132 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1aQ9D132 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms