Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf135Q9CWS1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf135Q9CWS1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf135Q9CWS1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rnf135Q9CWS1 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf135Q9CWS1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf135Q9CWS1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 BC021767-201ENSMUST00000126387 1716 ntBASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Spcs1-204ENSMUST00000226782 949 ntBASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rnf135Q9CWS1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Gm5874-201ENSMUST00000096101 508 ntBASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf135Q9CWS1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf135Q9CWS1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf135Q9CWS1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf135Q9CWS1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms