Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Q9CR55 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Q9CR55 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q9CR55 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q9CR55 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q9CR55 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.58■□□□□ 0.41
Q9CR55 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Q9CR55 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Q9CR55 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q9CR55 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.58■□□□□ 0.4
Q9CR55 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q9CR55 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q9CR55 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q9CR55 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.57■□□□□ 0.4
Q9CR55 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Q9CR55 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Q9CR55 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q9CR55 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Q9CR55 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Q9CR55 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q9CR55 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q9CR55 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.55■□□□□ 0.4
Q9CR55 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Q9CR55 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q9CR55 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q9CR55 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Q9CR55 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q9CR55 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.54■□□□□ 0.4
Q9CR55 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Q9CR55 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q9CR55 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.54■□□□□ 0.4
Q9CR55 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Q9CR55 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q9CR55 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Q9CR55 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.53■□□□□ 0.4
Q9CR55 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.53■□□□□ 0.4
Q9CR55 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Q9CR55 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Q9CR55 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CR55 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CR55 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CR55 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CR55 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.52■□□□□ 0.4
Q9CR55 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.52■□□□□ 0.4
Q9CR55 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.52■□□□□ 0.4
Q9CR55 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Q9CR55 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms