Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx6-1Q99MA9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx6-1Q99MA9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nkx6-1Q99MA9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nkx6-1Q99MA9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-1Q99MA9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-1Q99MA9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nkx6-1Q99MA9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nkx6-1Q99MA9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nkx6-1Q99MA9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.81■□□□□ 0.44
Nkx6-1Q99MA9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nkx6-1Q99MA9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms