Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Golph3-205ENSMUST00000228671 2842 ntBASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smtnl1Q99LM3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smtnl1Q99LM3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smtnl1Q99LM3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.83■□□□□ 0.93
Smtnl1Q99LM3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.83■□□□□ 0.93
Smtnl1Q99LM3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smtnl1Q99LM3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Smtnl1Q99LM3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smtnl1Q99LM3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 BC021767-201ENSMUST00000126387 1716 ntBASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smtnl1Q99LM3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smtnl1Q99LM3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smtnl1Q99LM3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smtnl1Q99LM3 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Smtnl1Q99LM3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms