Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smarcd2Q99JR8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd2Q99JR8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd2Q99JR8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd2Q99JR8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd2Q99JR8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smarcd2Q99JR8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smarcd2Q99JR8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Smarcd2Q99JR8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Smarcd2Q99JR8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smarcd2Q99JR8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smarcd2Q99JR8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smarcd2Q99JR8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smarcd2Q99JR8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcd2Q99JR8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smarcd2Q99JR8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smarcd2Q99JR8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms