Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdha8Q91Y12 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdha8Q91Y12 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.46■□□□□ 0.54
Pcdha8Q91Y12 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdha8Q91Y12 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdha8Q91Y12 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Gm27801-201ENSMUST00000184174 223 ntBASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Gm40848-201ENSMUST00000221998 324 ntBASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdha8Q91Y12 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdha8Q91Y12 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdha8Q91Y12 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
Pcdha8Q91Y12 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.4■□□□□ 0.54
Pcdha8Q91Y12 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms