Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb22Q91XZ8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Gm42642-201ENSMUST00000200683 355 ntBASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Gm10033-202ENSMUST00000211874 928 ntBASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb22Q91XZ8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb22Q91XZ8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhb22Q91XZ8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb22Q91XZ8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhb22Q91XZ8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.25■■□□□ 1.15
Pcdhb22Q91XZ8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhb22Q91XZ8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb22Q91XZ8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb22Q91XZ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb22Q91XZ8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb22Q91XZ8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Gm13534-201ENSMUST00000121169 513 ntBASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Gm18671-201ENSMUST00000214826 683 ntBASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.21■■□□□ 1.15
Pcdhb22Q91XZ8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.2■■□□□ 1.14
Pcdhb22Q91XZ8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms