Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb8Q91XZ2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Gm43017-201ENSMUST00000198296 752 ntBASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb8Q91XZ2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb8Q91XZ2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb8Q91XZ2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Gm27801-201ENSMUST00000184174 223 ntBASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb8Q91XZ2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Gm40848-201ENSMUST00000221998 324 ntBASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb8Q91XZ2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb8Q91XZ2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Pcdhb8Q91XZ2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 234.4 ms