Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga6Q91XY2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga6Q91XY2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga6Q91XY2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhga6Q91XY2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga6Q91XY2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga6Q91XY2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhga6Q91XY2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga6Q91XY2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Gm6420-201ENSMUST00000193885 723 ntBASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga6Q91XY2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga6Q91XY2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga6Q91XY2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.78■□□□□ 0.6
Pcdhga6Q91XY2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms