Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trex1Q91XB0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.95■■□□□ 1.1
Trex1Q91XB0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trex1Q91XB0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.94■■□□□ 1.1
Trex1Q91XB0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Trex1Q91XB0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Gm13168-201ENSMUST00000121771 632 ntBASIC21.93■■□□□ 1.1
Trex1Q91XB0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trex1Q91XB0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trex1Q91XB0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.91■■□□□ 1.1
Trex1Q91XB0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trex1Q91XB0 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.9■■□□□ 1.1
Trex1Q91XB0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trex1Q91XB0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trex1Q91XB0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.89■■□□□ 1.1
Trex1Q91XB0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trex1Q91XB0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Trmt13-210ENSMUST00000198454 880 ntBASIC21.89■■□□□ 1.09
Trex1Q91XB0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trex1Q91XB0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trex1Q91XB0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.87■■□□□ 1.09
Trex1Q91XB0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trex1Q91XB0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms