Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rab40cQ8VHQ4 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rab40cQ8VHQ4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rab40cQ8VHQ4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40cQ8VHQ4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.52■□□□□ 0.08
Rab40cQ8VHQ4 Grk6-206ENSMUST00000224995 2971 ntBASIC15.52■□□□□ 0.07
Rab40cQ8VHQ4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40cQ8VHQ4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40cQ8VHQ4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40cQ8VHQ4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms