Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rab40bQ8VHP8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rab40bQ8VHP8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab40bQ8VHP8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Gm7417-201ENSMUST00000192950 473 ntBASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rab40bQ8VHP8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab40bQ8VHP8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab40bQ8VHP8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab40bQ8VHP8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab40bQ8VHP8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rab40bQ8VHP8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms