Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Gm7977-201ENSMUST00000193787 748 ntBASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Uhrf1Q8VDF2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Uhrf1Q8VDF2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Uhrf1Q8VDF2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Uhrf1Q8VDF2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Uhrf1Q8VDF2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Uhrf1Q8VDF2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.7■□□□□ 0.74
Uhrf1Q8VDF2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Uhrf1Q8VDF2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Uhrf1Q8VDF2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Uhrf1Q8VDF2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.67■□□□□ 0.74
Uhrf1Q8VDF2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Uhrf1Q8VDF2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.67■□□□□ 0.74
Uhrf1Q8VDF2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Uhrf1Q8VDF2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms