Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf8Q8VC56 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Gm8493-201ENSMUST00000196881 489 ntBASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Spcs1-204ENSMUST00000226782 949 ntBASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Gm6139-201ENSMUST00000079261 882 ntBASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf8Q8VC56 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf8Q8VC56 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf8Q8VC56 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf8Q8VC56 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Rnf8Q8VC56 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf8Q8VC56 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rnf8Q8VC56 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf8Q8VC56 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms