Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chrna3Q8R4G9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chrna3Q8R4G9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Chrna3Q8R4G9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chrna3Q8R4G9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chrna3Q8R4G9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chrna3Q8R4G9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chrna3Q8R4G9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Chrna3Q8R4G9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.63■□□□□ 0.57
Chrna3Q8R4G9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms