Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ccdc58Q8R3Q6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccdc58Q8R3Q6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Etf1-202ENSMUST00000180351 108 ntBASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.99■□□□□ 0.31
Ccdc58Q8R3Q6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ccdc58Q8R3Q6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.97■□□□□ 0.31
Ccdc58Q8R3Q6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.96■□□□□ 0.31
Ccdc58Q8R3Q6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc58Q8R3Q6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc58Q8R3Q6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ccdc58Q8R3Q6 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ccdc58Q8R3Q6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms