Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nudcd3Q8R1N4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nudcd3Q8R1N4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nudcd3Q8R1N4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Nudcd3Q8R1N4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nudcd3Q8R1N4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Nudcd3Q8R1N4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nudcd3Q8R1N4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nudcd3Q8R1N4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Nudcd3Q8R1N4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nudcd3Q8R1N4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.01■□□□□ 0.63
Nudcd3Q8R1N4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nudcd3Q8R1N4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nudcd3Q8R1N4 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nudcd3Q8R1N4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nudcd3Q8R1N4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nudcd3Q8R1N4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms