Protein–RNA interactions for Protein: Q8K5C8

Rdh9, Cis-retinol/androgen dehydrogenase type 3, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh9Q8K5C8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh9Q8K5C8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh9Q8K5C8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh9Q8K5C8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rdh9Q8K5C8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.56■□□□□ 0.24
Rdh9Q8K5C8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Gm11421-201ENSMUST00000122124 294 ntBASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rdh9Q8K5C8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rdh9Q8K5C8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rdh9Q8K5C8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rdh9Q8K5C8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh9Q8K5C8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh9Q8K5C8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rdh9Q8K5C8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rdh9Q8K5C8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Rdh9Q8K5C8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms