Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Smad6-203ENSMUST00000179458 273 ntBASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cchcr1Q8K2I2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Gm11421-201ENSMUST00000122124 294 ntBASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cchcr1Q8K2I2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cchcr1Q8K2I2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Gm12821-201ENSMUST00000120022 600 ntBASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Cchcr1Q8K2I2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cchcr1Q8K2I2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cchcr1Q8K2I2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cchcr1Q8K2I2 Gm8493-201ENSMUST00000196881 489 ntBASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Cchcr1Q8K2I2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cchcr1Q8K2I2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Gm43173-201ENSMUST00000202246 593 ntBASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cchcr1Q8K2I2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cchcr1Q8K2I2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms