Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trnt1Q8K1J6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trnt1Q8K1J6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Gm7860-201ENSMUST00000121190 879 ntBASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trnt1Q8K1J6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trnt1Q8K1J6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trnt1Q8K1J6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.39■□□□□ 0.53
Trnt1Q8K1J6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trnt1Q8K1J6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trnt1Q8K1J6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trnt1Q8K1J6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trnt1Q8K1J6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms