Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Reep4-203ENSMUST00000226563 1444 ntBASIC22■■□□□ 1.11
Rtn1Q8K0T0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Rtn1Q8K0T0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rtn1Q8K0T0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.98■■□□□ 1.11
Rtn1Q8K0T0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rtn1Q8K0T0 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Rtn1Q8K0T0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rtn1Q8K0T0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Rtn1Q8K0T0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Gm5874-201ENSMUST00000096101 508 ntBASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rtn1Q8K0T0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Gm13234-201ENSMUST00000120010 747 ntBASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Iqck-206ENSMUST00000208658 2891 ntBASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rtn1Q8K0T0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rtn1Q8K0T0 Gm18284-201ENSMUST00000172604 624 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms