Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1aQ8CIG0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1aQ8CIG0 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.58■■□□□ 1.05
Depdc1aQ8CIG0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Depdc1aQ8CIG0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Depdc1aQ8CIG0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Depdc1aQ8CIG0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Gm6211-202ENSMUST00000167849 925 ntBASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.57■■□□□ 1.04
Depdc1aQ8CIG0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Depdc1aQ8CIG0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Depdc1aQ8CIG0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Depdc1aQ8CIG0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Gm4968-201ENSMUST00000071458 858 ntBASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Depdc1aQ8CIG0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Gm27011-201ENSMUST00000182352 972 ntBASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Depdc1aQ8CIG0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Depdc1aQ8CIG0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.5■■□□□ 1.03
Depdc1aQ8CIG0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms