Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Shisa4Q8CA71 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shisa4Q8CA71 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shisa4Q8CA71 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Shisa4Q8CA71 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shisa4Q8CA71 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa4Q8CA71 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa4Q8CA71 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa4Q8CA71 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.25■■□□□ 1.15
Shisa4Q8CA71 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa4Q8CA71 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shisa4Q8CA71 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shisa4Q8CA71 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Gm7514-201ENSMUST00000209475 934 ntBASIC22.23■■□□□ 1.15
Shisa4Q8CA71 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shisa4Q8CA71 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.22■■□□□ 1.15
Shisa4Q8CA71 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms