Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim9Q8C7M3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim9Q8C7M3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim9Q8C7M3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 BC021767-201ENSMUST00000126387 1716 ntBASIC21.04■□□□□ 0.96
Trim9Q8C7M3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim9Q8C7M3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim9Q8C7M3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim9Q8C7M3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trim9Q8C7M3 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim9Q8C7M3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim9Q8C7M3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim9Q8C7M3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trim9Q8C7M3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim9Q8C7M3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21■□□□□ 0.95
Trim9Q8C7M3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21■□□□□ 0.95
Trim9Q8C7M3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21■□□□□ 0.95
Trim9Q8C7M3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim9Q8C7M3 Gm43231-201ENSMUST00000202960 2258 ntBASIC21■□□□□ 0.95
Trim9Q8C7M3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms