Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap54Q8C6S9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap54Q8C6S9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Mir5122-201ENSMUST00000175004 89 ntBASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap54Q8C6S9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cfap54Q8C6S9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cfap54Q8C6S9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cfap54Q8C6S9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cfap54Q8C6S9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cfap54Q8C6S9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Gm9987-201ENSMUST00000069768 567 ntBASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cfap54Q8C6S9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cfap54Q8C6S9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms