Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc60Q8C4J0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccdc60Q8C4J0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccdc60Q8C4J0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccdc60Q8C4J0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ccdc60Q8C4J0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Gm13234-201ENSMUST00000120010 747 ntBASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Gm42778-201ENSMUST00000199644 553 ntBASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccdc60Q8C4J0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Gm8495-201ENSMUST00000188740 694 ntBASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Gm42642-201ENSMUST00000200683 355 ntBASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc60Q8C4J0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Ccdc60Q8C4J0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Gm10033-202ENSMUST00000211874 928 ntBASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccdc60Q8C4J0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc60Q8C4J0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Ccdc60Q8C4J0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccdc60Q8C4J0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.28■■□□□ 1.48
Ccdc60Q8C4J0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Iqck-206ENSMUST00000208658 2891 ntBASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Ccdc60Q8C4J0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC24.26■■□□□ 1.47
Ccdc60Q8C4J0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
Ccdc60Q8C4J0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Gm26571-201ENSMUST00000181399 666 ntBASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 AC124603.1-201ENSMUST00000223843 308 ntBASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Gm5540-201ENSMUST00000131852 1848 ntBASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc60Q8C4J0 Gm18688-201ENSMUST00000204695 1859 ntBASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Gm13146-201ENSMUST00000118508 780 ntBASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc60Q8C4J0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc60Q8C4J0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc60Q8C4J0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc60Q8C4J0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc60Q8C4J0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc60Q8C4J0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Ccdc60Q8C4J0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ccdc60Q8C4J0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ccdc60Q8C4J0 Gm18671-201ENSMUST00000214826 683 ntBASIC24.22■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms