Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3rf3Q8C120 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3rf3Q8C120 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Gm43060-201ENSMUST00000200621 289 ntBASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.8■□□□□ 0.76
Sh3rf3Q8C120 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Gm27801-201ENSMUST00000184174 223 ntBASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3rf3Q8C120 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Sh3rf3Q8C120 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Sh3rf3Q8C120 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3rf3Q8C120 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3rf3Q8C120 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sh3rf3Q8C120 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf3Q8C120 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sh3rf3Q8C120 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf3Q8C120 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3rf3Q8C120 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms