Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Gm15820-201ENSMUST00000201566 728 ntBASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lsm11Q8BUV6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lsm11Q8BUV6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm11Q8BUV6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm11Q8BUV6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm11Q8BUV6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Serp2-204ENSMUST00000228055 705 ntBASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.12■□□□□ 0.17
Lsm11Q8BUV6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lsm11Q8BUV6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms