Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VmacQ8BP01 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22■■□□□ 1.11
VmacQ8BP01 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
VmacQ8BP01 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22■■□□□ 1.11
VmacQ8BP01 AC099934.2-201ENSMUST00000196389 70 ntBASIC22■■□□□ 1.11
VmacQ8BP01 AC156953.1-201ENSMUST00000196953 70 ntBASIC22■■□□□ 1.11
VmacQ8BP01 AC157822.2-201ENSMUST00000200291 70 ntBASIC22■■□□□ 1.11
VmacQ8BP01 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22■■□□□ 1.11
VmacQ8BP01 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VmacQ8BP01 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VmacQ8BP01 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VmacQ8BP01 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VmacQ8BP01 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VmacQ8BP01 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
VmacQ8BP01 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.99■■□□□ 1.11
VmacQ8BP01 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.99■■□□□ 1.11
VmacQ8BP01 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
VmacQ8BP01 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VmacQ8BP01 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.98■■□□□ 1.11
VmacQ8BP01 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
VmacQ8BP01 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
VmacQ8BP01 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
VmacQ8BP01 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VmacQ8BP01 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
VmacQ8BP01 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VmacQ8BP01 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
VmacQ8BP01 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
VmacQ8BP01 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
VmacQ8BP01 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.95■■□□□ 1.1
VmacQ8BP01 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
VmacQ8BP01 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VmacQ8BP01 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Gm18284-201ENSMUST00000172604 624 ntBASIC21.94■■□□□ 1.1
VmacQ8BP01 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
VmacQ8BP01 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VmacQ8BP01 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
VmacQ8BP01 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Gm13534-201ENSMUST00000121169 513 ntBASIC21.93■■□□□ 1.1
VmacQ8BP01 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
VmacQ8BP01 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Gm5874-201ENSMUST00000096101 508 ntBASIC21.93■■□□□ 1.1
VmacQ8BP01 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
VmacQ8BP01 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VmacQ8BP01 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.93■■□□□ 1.1
VmacQ8BP01 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VmacQ8BP01 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms