Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap4Q8BMK4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ckap4Q8BMK4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap4Q8BMK4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ckap4Q8BMK4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ckap4Q8BMK4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.93■□□□□ 0.46
Ckap4Q8BMK4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap4Q8BMK4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap4Q8BMK4 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap4Q8BMK4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap4Q8BMK4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms