Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.34■□□□□ 0.53
Rnf38Q8BI21 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.33■□□□□ 0.53
Rnf38Q8BI21 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.33■□□□□ 0.52
Rnf38Q8BI21 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Gm21956-201ENSMUST00000179946 522 ntBASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf38Q8BI21 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf38Q8BI21 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Rnf38Q8BI21 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf38Q8BI21 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms