Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Scn3bQ8BHK2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Scn3bQ8BHK2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn3bQ8BHK2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Scn3bQ8BHK2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scn3bQ8BHK2 Rarb-207ENSMUST00000225921 2756 ntBASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn3bQ8BHK2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn3bQ8BHK2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn3bQ8BHK2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms