Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim23Q8BGX0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim23Q8BGX0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim23Q8BGX0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim23Q8BGX0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim23Q8BGX0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim23Q8BGX0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim23Q8BGX0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim23Q8BGX0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim23Q8BGX0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim23Q8BGX0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim23Q8BGX0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim23Q8BGX0 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms